Plasmid_Backbone

Part:BBa_K1441001

Designed by: Reza Alavi   Group: iGEM14_Georgia_State   (2014-10-02)


PGAPz alpha C + Linker

This plasmid is PGAPzα C + modified Multiple Cloning Site(MCS) (Linker) fixed according to iGEM standards. We replaced old multiple cloning cite with new modified multiple cloning site, which has new cutting sites according to iGEM standard. The original MCS has ECORI, KpnI, NotI and XbaI restriction enzyme binding sites compared to the new MCS we designed in which there are ECORI, NotI, XbaI, SpeI and PstI restriction enzyme cutting sites. PGAPzα C + Linker has α-secretion factor before MCS which allows yeast cells and some Eukaryotic cells to secrete the protein into the outside of the cell membrane. Also after MCS there are MYC epitope and 6x histag that are used to tag the protein so it can be easily identified by westernblot technique.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 765
    Illegal XbaI site found at 788
    Illegal SpeI site found at 803
    Illegal PstI site found at 825
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 765
    Illegal SpeI site found at 803
    Illegal PstI site found at 825
    Illegal NotI site found at 776
    Illegal NotI site found at 814
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 765
    Illegal BglII site found at 1
    Illegal BamHI site found at 1243
    Illegal XhoI site found at 736
  • 23
    INCOMPATIBLE WITH RFC[23]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 765
    Illegal XbaI site found at 788
    Illegal SpeI site found at 803
    Illegal PstI site found at 825
  • 25
    INCOMPATIBLE WITH RFC[25]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 765
    Illegal XbaI site found at 788
    Illegal SpeI site found at 803
    Illegal PstI site found at 825
    Illegal NgoMIV site found at 2000
    Illegal NgoMIV site found at 2061
    Illegal AgeI site found at 962
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI.rc site found at 1226
    Illegal BsaI.rc site found at 1425
    Illegal BsaI.rc site found at 2422
    Illegal SapI site found at 244


[edit]
Categories
Parameters
n/aPGAPz alpha C + Linker